The Council shall, by ordinance, provide for a Court Clerk and one or more Deputy Clerks who shall be appointed in accordance with the civil service provisions of this Charter and who shall enjoy all the privileges of employees of the City under such civil service provisions to perform such duties as shall be therein prescribed. The Clerk and Deputy Clerks of the Municipal Court shall be under the direction and control of the Municipal Judges and subject to their orders. Such Clerk and Deputy Clerks shall also, by virtue of their office, have the statutory powers to administer oaths to persons making affidavits for writs in civil causes and to issue all process and attest the same in the name of the presiding officer of the Court, and shall be required to collect all fees, costs, fines and other moneys paid into Court and to keep a record book of the same and to pay over all such moneys to the authorities of the City or County or other persons entitled to the same as directed by this Charter, by the proper authorities or by the law, and the Council shall cause such book to be audited annually.